Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB11Q9Y5F2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 AC011767.1-201ENST00000617410 1153 ntBASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 FAM99A-202ENST00000538190 1989 ntBASIC20.65■□□□□ 0.9
PCDHB11Q9Y5F2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB11Q9Y5F2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB11Q9Y5F2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB11Q9Y5F2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB11Q9Y5F2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PCDHB11Q9Y5F2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PCDHB11Q9Y5F2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 AC055733.4-201ENST00000638462 1354 ntBASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB11Q9Y5F2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB11Q9Y5F2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 CROCCP5-201ENST00000436658 830 ntBASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHB11Q9Y5F2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 GPX1P1-201ENST00000388829 606 ntBASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB11Q9Y5F2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 NCF1B-203ENST00000435988 1254 ntBASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDHB11Q9Y5F2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms