Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM3AQ9Y4C1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KDM3AQ9Y4C1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM3AQ9Y4C1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 KRT87P-202ENST00000534226 1464 ntBASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 AC026185.1-201ENST00000445748 174 ntBASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM3AQ9Y4C1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KDM3AQ9Y4C1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 HLA-L-209ENST00000420110 1011 ntBASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.75■■□□□ 1.39
KDM3AQ9Y4C1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.74■■□□□ 1.39
KDM3AQ9Y4C1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KDM3AQ9Y4C1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms