Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 MKRN4P-201ENST00000444706 1521 ntBASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1Q9Y2A7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1Q9Y2A7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 AC073210.2-201ENST00000430369 194 ntBASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1Q9Y2A7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 AL512625.2-201ENST00000417533 625 ntBASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 AC003102.1-202ENST00000563394 1796 ntBASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1Q9Y2A7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 ABHD17AP1-201ENST00000358206 933 ntBASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 AL591742.1-201ENST00000604433 565 ntBASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NCKAP1Q9Y2A7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 RBM17P2-201ENST00000616397 1405 ntBASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NCKAP1Q9Y2A7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 AC061975.6-201ENST00000579045 1553 ntBASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 AC127496.7-201ENST00000625110 1798 ntBASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 MIPEPP3-201ENST00000412105 444 ntBASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.1■□□□□ 0.97
NCKAP1Q9Y2A7 AC243732.1-201ENST00000612648 864 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms