Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN8AQ9UQD0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN8AQ9UQD0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN8AQ9UQD0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN8AQ9UQD0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN8AQ9UQD0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 AC006015.1-201ENST00000429970 570 ntBASIC21■□□□□ 0.95
SCN8AQ9UQD0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 KRT18P20-201ENST00000548986 1279 ntBASIC21■□□□□ 0.95
SCN8AQ9UQD0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN8AQ9UQD0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21■□□□□ 0.95
SCN8AQ9UQD0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 AC073111.5-205ENST00000641717 521 ntBASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN8AQ9UQD0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 HLA-L-209ENST00000420110 1011 ntBASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN8AQ9UQD0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 MYCNOS-205ENST00000641950 531 ntBASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 KRT16P2-201ENST00000414673 1423 ntBASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN8AQ9UQD0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN8AQ9UQD0 AC026310.3-201ENST00000625186 2373 ntBASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN8AQ9UQD0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 CDCA4P2-201ENST00000441182 718 ntBASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN8AQ9UQD0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms