Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.7■■■□□ 2.03
SPG7Q9UQ90 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.7■■■□□ 2.03
SPG7Q9UQ90 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SPG7Q9UQ90 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC27.7■■■□□ 2.03
SPG7Q9UQ90 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
SPG7Q9UQ90 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
SPG7Q9UQ90 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
SPG7Q9UQ90 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SPG7Q9UQ90 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SPG7Q9UQ90 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.02
SPG7Q9UQ90 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 DUSP5P2-201ENST00000426873 1033 ntBASIC27.69■■■□□ 2.02
SPG7Q9UQ90 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SPG7Q9UQ90 AC093827.2-201ENST00000512654 315 ntBASIC27.69■■■□□ 2.02
SPG7Q9UQ90 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC27.68■■■□□ 2.02
SPG7Q9UQ90 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SPG7Q9UQ90 AC092053.2-201ENST00000640557 1818 ntBASIC27.67■■■□□ 2.02
SPG7Q9UQ90 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 ESRRAP1-201ENST00000400596 1257 ntBASIC27.66■■■□□ 2.02
SPG7Q9UQ90 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 ADM-205ENST00000528544 586 ntTSL 2 BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
SPG7Q9UQ90 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.65■■■□□ 2.02
SPG7Q9UQ90 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SPG7Q9UQ90 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SPG7Q9UQ90 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SPG7Q9UQ90 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.64■■■□□ 2.02
SPG7Q9UQ90 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SPG7Q9UQ90 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.64■■■□□ 2.01
SPG7Q9UQ90 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 GAS7-202ENST00000396115 929 ntTSL 5 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
SPG7Q9UQ90 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
SPG7Q9UQ90 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SPG7Q9UQ90 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SPG7Q9UQ90 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC27.62■■■□□ 2.01
SPG7Q9UQ90 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.62■■■□□ 2.01
SPG7Q9UQ90 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC27.62■■■□□ 2.01
SPG7Q9UQ90 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC27.62■■■□□ 2.01
SPG7Q9UQ90 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.62■■■□□ 2.01
SPG7Q9UQ90 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms