Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 AC055733.4-201ENST00000638462 1354 ntBASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPA1Q9UND3 LINC00565-201ENST00000562710 2331 ntBASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 NCF1B-203ENST00000435988 1254 ntBASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 OR7E47P-201ENST00000546390 1422 ntBASIC19.42■□□□□ 0.7
NPIPA1Q9UND3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
NPIPA1Q9UND3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 GPX1P1-201ENST00000388829 606 ntBASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPA1Q9UND3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NPIPA1Q9UND3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.39■□□□□ 0.7
NPIPA1Q9UND3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
NPIPA1Q9UND3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPA1Q9UND3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 AC231657.2-201ENST00000624556 255 ntBASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPIPA1Q9UND3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 AC007322.1-201ENST00000426983 750 ntBASIC19.37■□□□□ 0.69
NPIPA1Q9UND3 DUX4L16-201ENST00000555130 1264 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms