Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC010141.3-201ENST00000456659 717 ntBASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 AL138724.1-201ENST00000606771 1088 ntBASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 LINC01006-201ENST00000333319 2292 ntBASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB4Q9UN71 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB4Q9UN71 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.33■□□□□ 0.85
PCDHGB4Q9UN71 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHGB4Q9UN71 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.32■□□□□ 0.84
PCDHGB4Q9UN71 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 AC104564.3-201ENST00000582367 638 ntBASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 FEM1AP4-201ENST00000443167 1987 ntBASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PCDHGB4Q9UN71 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 OXCT2P1-201ENST00000447263 1535 ntBASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGB4Q9UN71 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGB4Q9UN71 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms