Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGC3Q9UN70 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PCDHGC3Q9UN70 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L2-201ENST00000561772 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L6-201ENST00000626483 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L1-201ENST00000627662 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L8-201ENST00000629013 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L3-201ENST00000630187 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L7-201ENST00000630678 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DUX4L5-201ENST00000630834 1275 ntBASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGC3Q9UN70 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 AP004607.4-201ENST00000530158 1459 ntBASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDHGC3Q9UN70 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGC3Q9UN70 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.27■■□□□ 1.15
PCDHGC3Q9UN70 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
PCDHGC3Q9UN70 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 AC061975.6-201ENST00000579045 1553 ntBASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 AC004854.2-201ENST00000608450 1441 ntBASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 AC010141.2-201ENST00000452426 721 ntBASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 AC104187.1-201ENST00000607510 612 ntBASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 AL137060.1-201ENST00000618151 2648 ntBASIC22.26■■□□□ 1.15
PCDHGC3Q9UN70 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 POU5F1P4-201ENST00000413175 1085 ntBASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 AC008175.2-201ENST00000612840 297 ntBASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 AF106564.1-201ENST00000607058 2553 ntBASIC22.25■■□□□ 1.15
PCDHGC3Q9UN70 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms