Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 AL512625.2-201ENST00000417533 625 ntBASIC21.48■■□□□ 1.03
EBF1Q9UH73 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
EBF1Q9UH73 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
EBF1Q9UH73 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 AC093827.2-201ENST00000512654 315 ntBASIC21.47■■□□□ 1.03
EBF1Q9UH73 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
EBF1Q9UH73 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
EBF1Q9UH73 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 AC092118.2-201ENST00000613495 667 ntBASIC21.46■■□□□ 1.03
EBF1Q9UH73 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.46■■□□□ 1.03
EBF1Q9UH73 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
EBF1Q9UH73 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
EBF1Q9UH73 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF1Q9UH73 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF1Q9UH73 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 KRT18P29-201ENST00000397031 1267 ntBASIC21.45■■□□□ 1.02
EBF1Q9UH73 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
EBF1Q9UH73 RNA5SP413-201ENST00000516373 109 ntBASIC21.45■■□□□ 1.02
EBF1Q9UH73 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 AC233723.2-201ENST00000623798 2106 ntBASIC21.45■■□□□ 1.02
EBF1Q9UH73 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF1Q9UH73 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.45■■□□□ 1.02
EBF1Q9UH73 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
EBF1Q9UH73 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF1Q9UH73 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 AC008694.1-202ENST00000636953 945 ntBASIC21.44■■□□□ 1.02
EBF1Q9UH73 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
EBF1Q9UH73 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.44■■□□□ 1.02
EBF1Q9UH73 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.43■■□□□ 1.02
EBF1Q9UH73 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.43■■□□□ 1.02
EBF1Q9UH73 AC069236.1-201ENST00000604339 616 ntBASIC21.43■■□□□ 1.02
EBF1Q9UH73 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
EBF1Q9UH73 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.43■■□□□ 1.02
EBF1Q9UH73 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
EBF1Q9UH73 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EBF1Q9UH73 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
EBF1Q9UH73 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
EBF1Q9UH73 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
EBF1Q9UH73 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms