Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SPHK1Q9NYA1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 AC011767.1-201ENST00000617410 1153 ntBASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SPHK1Q9NYA1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 KRT18P11-201ENST00000435214 1283 ntBASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 MYCNOS-205ENST00000641950 531 ntBASIC20.34■□□□□ 0.85
SPHK1Q9NYA1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 KRT18P20-201ENST00000548986 1279 ntBASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 MFSD11-216ENST00000590393 1141 ntBASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 AC080038.1-201ENST00000611274 1154 ntBASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 AC008175.2-201ENST00000612840 297 ntBASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 BID-214ENST00000617586 542 ntTSL 5 BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SPHK1Q9NYA1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SPHK1Q9NYA1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
SPHK1Q9NYA1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPHK1Q9NYA1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.33■□□□□ 0.84
SPHK1Q9NYA1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPHK1Q9NYA1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SPHK1Q9NYA1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SPHK1Q9NYA1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 RARRES2P11-201ENST00000635158 484 ntBASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPHK1Q9NYA1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms