Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 AC008403.3-201ENST00000598924 454 ntBASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
SLC52A1Q9NWF4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC30.52■■■□□ 2.48
SLC52A1Q9NWF4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SLC52A1Q9NWF4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SLC52A1Q9NWF4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SLC52A1Q9NWF4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
SLC52A1Q9NWF4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 NME6-213ENST00000451657 871 ntTSL 2 BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 HLA-B-256ENST00000639848 1089 ntBASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
SLC52A1Q9NWF4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 CYP2T3P-201ENST00000601990 817 ntBASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SLC52A1Q9NWF4 AC003102.1-202ENST00000563394 1796 ntBASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 UBE2SP1-201ENST00000450587 669 ntBASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 AC008550.1-201ENST00000511500 884 ntBASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 AC060766.5-201ENST00000590539 871 ntBASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SLC52A1Q9NWF4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 AL355472.2-201ENST00000422958 438 ntBASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SLC52A1Q9NWF4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC52A1Q9NWF4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 AL359736.2-201ENST00000621992 437 ntBASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC52A1Q9NWF4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC30.45■■■□□ 2.47
SLC52A1Q9NWF4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SLC52A1Q9NWF4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC30.45■■■□□ 2.47
SLC52A1Q9NWF4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.45■■■□□ 2.47
SLC52A1Q9NWF4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC30.45■■■□□ 2.47
SLC52A1Q9NWF4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.47
SLC52A1Q9NWF4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
SLC52A1Q9NWF4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
SLC52A1Q9NWF4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.46
SLC52A1Q9NWF4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.45■■■□□ 2.46
SLC52A1Q9NWF4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC30.44■■■□□ 2.46
SLC52A1Q9NWF4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.44■■■□□ 2.46
SLC52A1Q9NWF4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.44■■■□□ 2.46
SLC52A1Q9NWF4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SLC52A1Q9NWF4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.44■■■□□ 2.46
SLC52A1Q9NWF4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SLC52A1Q9NWF4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC30.43■■■□□ 2.46
SLC52A1Q9NWF4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms