Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 AC004854.2-201ENST00000608450 1441 ntBASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCUBE2Q9NQ36 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 LINC00565-201ENST00000562710 2331 ntBASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCUBE2Q9NQ36 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 AP004607.4-201ENST00000530158 1459 ntBASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 EEF1DP3-203ENST00000566025 782 ntBASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 AC080038.1-201ENST00000611274 1154 ntBASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 AC066615.1-201ENST00000640911 628 ntBASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCUBE2Q9NQ36 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 PKD1P6-201ENST00000343738 4769 ntBASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 AC053503.5-201ENST00000601508 636 ntBASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SCUBE2Q9NQ36 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 AC104187.1-201ENST00000607510 612 ntBASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
SCUBE2Q9NQ36 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE2Q9NQ36 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SCUBE2Q9NQ36 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms