Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.04■■□□□ 1.12
CD248Q9HCU0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.04■■□□□ 1.12
CD248Q9HCU0 AC137761.2-201ENST00000561729 223 ntBASIC22.04■■□□□ 1.12
CD248Q9HCU0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.04■■□□□ 1.12
CD248Q9HCU0 AC145350.3-201ENST00000569033 163 ntBASIC22.04■■□□□ 1.12
CD248Q9HCU0 AC087239.1-201ENST00000622671 572 ntBASIC22.04■■□□□ 1.12
CD248Q9HCU0 AC073111.5-205ENST00000641717 521 ntBASIC22.04■■□□□ 1.12
CD248Q9HCU0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD248Q9HCU0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.04■■□□□ 1.12
CD248Q9HCU0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD248Q9HCU0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.04■■□□□ 1.12
CD248Q9HCU0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CD248Q9HCU0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.03■■□□□ 1.12
CD248Q9HCU0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.03■■□□□ 1.12
CD248Q9HCU0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.03■■□□□ 1.12
CD248Q9HCU0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.03■■□□□ 1.12
CD248Q9HCU0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD248Q9HCU0 AC026310.3-201ENST00000625186 2373 ntBASIC22.03■■□□□ 1.12
CD248Q9HCU0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 HLA-L-209ENST00000420110 1011 ntBASIC22.02■■□□□ 1.12
CD248Q9HCU0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CD248Q9HCU0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD248Q9HCU0 AC007952.6-201ENST00000573168 2673 ntBASIC22.02■■□□□ 1.11
CD248Q9HCU0 AC003957.1-201ENST00000625108 2673 ntBASIC22.02■■□□□ 1.11
CD248Q9HCU0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CD248Q9HCU0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.01■■□□□ 1.11
CD248Q9HCU0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.01■■□□□ 1.11
CD248Q9HCU0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CD248Q9HCU0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.01■■□□□ 1.11
CD248Q9HCU0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.01■■□□□ 1.11
CD248Q9HCU0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD248Q9HCU0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD248Q9HCU0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD248Q9HCU0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD248Q9HCU0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22■■□□□ 1.11
CD248Q9HCU0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22■■□□□ 1.11
CD248Q9HCU0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22■■□□□ 1.11
CD248Q9HCU0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22■■□□□ 1.11
CD248Q9HCU0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22■■□□□ 1.11
CD248Q9HCU0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22■■□□□ 1.11
CD248Q9HCU0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22■■□□□ 1.11
CD248Q9HCU0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CD248Q9HCU0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CD248Q9HCU0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CD248Q9HCU0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD248Q9HCU0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD248Q9HCU0 AC016769.1-201ENST00000409132 1010 ntBASIC21.99■■□□□ 1.11
CD248Q9HCU0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.99■■□□□ 1.11
CD248Q9HCU0 AF106564.1-201ENST00000607058 2553 ntBASIC21.99■■□□□ 1.11
CD248Q9HCU0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD248Q9HCU0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CD248Q9HCU0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD248Q9HCU0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD248Q9HCU0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.99■■□□□ 1.11
CD248Q9HCU0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CD248Q9HCU0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD248Q9HCU0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD248Q9HCU0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD248Q9HCU0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CD248Q9HCU0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD248Q9HCU0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD248Q9HCU0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD248Q9HCU0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CD248Q9HCU0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CD248Q9HCU0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
CD248Q9HCU0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD248Q9HCU0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms