Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 AC006015.1-201ENST00000429970 570 ntBASIC21.32■■□□□ 1
ATP13A3Q9H7F0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 KRT18P20-201ENST00000548986 1279 ntBASIC21.32■■□□□ 1
ATP13A3Q9H7F0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A3Q9H7F0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.31■■□□□ 1
ATP13A3Q9H7F0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 AC092437.1-201ENST00000624794 1048 ntBASIC21.31■■□□□ 1
ATP13A3Q9H7F0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.31■■□□□ 1
ATP13A3Q9H7F0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 AC120498.10-201ENST00000621827 505 ntBASIC21.3■■□□□ 1
ATP13A3Q9H7F0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A3Q9H7F0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 UBE2DNL-204ENST00000602536 740 ntBASIC21.29■■□□□ 1
ATP13A3Q9H7F0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
ATP13A3Q9H7F0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A3Q9H7F0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.27■■□□□ 1
ATP13A3Q9H7F0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
ATP13A3Q9H7F0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A3Q9H7F0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A3Q9H7F0 AC004911.1-201ENST00000416316 871 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms