Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 THA1P-201ENST00000590384 1145 ntBASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.36■□□□□ 0.05
MAP1LC3AQ9H492 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 AP005212.1-201ENST00000581547 1997 ntBASIC15.35■□□□□ 0.05
MAP1LC3AQ9H492 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 AL391422.3-201ENST00000603791 2761 ntBASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
MAP1LC3AQ9H492 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MAP1LC3AQ9H492 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
MAP1LC3AQ9H492 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.33■□□□□ 0.05
MAP1LC3AQ9H492 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MAP1LC3AQ9H492 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 AC026471.6-201ENST00000622954 1905 ntBASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
MAP1LC3AQ9H492 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MAP1LC3AQ9H492 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms