Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
HIPK3Q9H422 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HIPK3Q9H422 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HIPK3Q9H422 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HIPK3Q9H422 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
HIPK3Q9H422 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIPK3Q9H422 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HIPK3Q9H422 UBE2SP1-201ENST00000450587 669 ntBASIC23.18■■□□□ 1.3
HIPK3Q9H422 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HIPK3Q9H422 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.18■■□□□ 1.3
HIPK3Q9H422 AC061975.6-201ENST00000579045 1553 ntBASIC23.18■■□□□ 1.3
HIPK3Q9H422 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIPK3Q9H422 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIPK3Q9H422 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIPK3Q9H422 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIPK3Q9H422 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HIPK3Q9H422 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HIPK3Q9H422 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.17■■□□□ 1.3
HIPK3Q9H422 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
HIPK3Q9H422 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HIPK3Q9H422 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HIPK3Q9H422 KRT17P1-201ENST00000399211 1546 ntBASIC23.15■■□□□ 1.3
HIPK3Q9H422 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIPK3Q9H422 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HIPK3Q9H422 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 AL359736.2-201ENST00000621992 437 ntBASIC23.15■■□□□ 1.3
HIPK3Q9H422 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 AC137767.1-201ENST00000602918 1920 ntBASIC23.15■■□□□ 1.3
HIPK3Q9H422 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIPK3Q9H422 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.15■■□□□ 1.3
HIPK3Q9H422 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HIPK3Q9H422 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.3
HIPK3Q9H422 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
HIPK3Q9H422 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HIPK3Q9H422 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
HIPK3Q9H422 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.14■■□□□ 1.29
HIPK3Q9H422 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.14■■□□□ 1.29
HIPK3Q9H422 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
HIPK3Q9H422 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.14■■□□□ 1.29
HIPK3Q9H422 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.14■■□□□ 1.29
HIPK3Q9H422 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HIPK3Q9H422 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 AL355472.2-201ENST00000422958 438 ntBASIC23.13■■□□□ 1.29
HIPK3Q9H422 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.13■■□□□ 1.29
HIPK3Q9H422 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
HIPK3Q9H422 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HIPK3Q9H422 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms