Protein–RNA interactions for Protein: Q9H2M9

RAB3GAP2, Rab3 GTPase-activating protein non-catalytic subunit, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2Q9H2M9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RAB3GAP2Q9H2M9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
RAB3GAP2Q9H2M9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.39■■■□□ 2.62
RAB3GAP2Q9H2M9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
RAB3GAP2Q9H2M9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RAB3GAP2Q9H2M9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 SLC7A5P2-201ENST00000553010 536 ntBASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB3GAP2Q9H2M9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.37■■■□□ 2.61
RAB3GAP2Q9H2M9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 Z98882.1-201ENST00000622160 2253 ntBASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.36■■■□□ 2.61
RAB3GAP2Q9H2M9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RAB3GAP2Q9H2M9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 MFSD11-216ENST00000590393 1141 ntBASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 MYCNOS-205ENST00000641950 531 ntBASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAB3GAP2Q9H2M9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 KRT18P20-201ENST00000548986 1279 ntBASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RAB3GAP2Q9H2M9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 AC092666.2-201ENST00000613287 246 ntBASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RAB3GAP2Q9H2M9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
RAB3GAP2Q9H2M9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.3■■■□□ 2.6
RAB3GAP2Q9H2M9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAB3GAP2Q9H2M9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RAB3GAP2Q9H2M9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
RAB3GAP2Q9H2M9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC31.29■■■□□ 2.6
RAB3GAP2Q9H2M9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAB3GAP2Q9H2M9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAB3GAP2Q9H2M9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms