Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
VPS11Q9H270 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VPS11Q9H270 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
VPS11Q9H270 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
VPS11Q9H270 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
VPS11Q9H270 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS11Q9H270 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS11Q9H270 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
VPS11Q9H270 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
VPS11Q9H270 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
VPS11Q9H270 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.14■□□□□ 0.97
VPS11Q9H270 AL356441.2-201ENST00000443009 864 ntBASIC21.14■□□□□ 0.97
VPS11Q9H270 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.14■□□□□ 0.97
VPS11Q9H270 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.14■□□□□ 0.97
VPS11Q9H270 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VPS11Q9H270 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
VPS11Q9H270 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS11Q9H270 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS11Q9H270 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VPS11Q9H270 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
VPS11Q9H270 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.13■□□□□ 0.97
VPS11Q9H270 AL138724.1-201ENST00000606771 1088 ntBASIC21.13■□□□□ 0.97
VPS11Q9H270 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS11Q9H270 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
VPS11Q9H270 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.13■□□□□ 0.97
VPS11Q9H270 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VPS11Q9H270 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS11Q9H270 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
VPS11Q9H270 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS11Q9H270 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS11Q9H270 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.12■□□□□ 0.97
VPS11Q9H270 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.12■□□□□ 0.97
VPS11Q9H270 MIR4466-201ENST00000606121 54 ntBASIC21.12■□□□□ 0.97
VPS11Q9H270 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 AC003102.1-202ENST00000563394 1796 ntBASIC21.12■□□□□ 0.97
VPS11Q9H270 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.12■□□□□ 0.97
VPS11Q9H270 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VPS11Q9H270 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
VPS11Q9H270 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
VPS11Q9H270 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
VPS11Q9H270 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VPS11Q9H270 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.11■□□□□ 0.97
VPS11Q9H270 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
VPS11Q9H270 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 SLC47A1P1-202ENST00000449666 945 ntBASIC21.11■□□□□ 0.97
VPS11Q9H270 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
VPS11Q9H270 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.11■□□□□ 0.97
VPS11Q9H270 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS11Q9H270 DUX4L19-201ENST00000557448 1267 ntBASIC21.11■□□□□ 0.97
VPS11Q9H270 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS11Q9H270 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS11Q9H270 AC136469.2-201ENST00000623944 1028 ntBASIC21.11■□□□□ 0.97
VPS11Q9H270 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
VPS11Q9H270 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS11Q9H270 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.11■□□□□ 0.97
VPS11Q9H270 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.11■□□□□ 0.97
VPS11Q9H270 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.11■□□□□ 0.97
VPS11Q9H270 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.1■□□□□ 0.97
VPS11Q9H270 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
VPS11Q9H270 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
VPS11Q9H270 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
VPS11Q9H270 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
VPS11Q9H270 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VPS11Q9H270 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VPS11Q9H270 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VPS11Q9H270 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms