Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J3Q9H1A7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 AL136116.3-201ENST00000402907 1138 ntBASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J3Q9H1A7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 AC233992.3-201ENST00000607491 485 ntBASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J3Q9H1A7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 SMUG1P1-201ENST00000590640 811 ntBASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2J3Q9H1A7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 MIR4767-201ENST00000582827 78 ntBASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
POLR2J3Q9H1A7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J3Q9H1A7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J3Q9H1A7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.39■□□□□ 0.7
POLR2J3Q9H1A7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
POLR2J3Q9H1A7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
POLR2J3Q9H1A7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
POLR2J3Q9H1A7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 UNC93B3-201ENST00000308076 687 ntBASIC19.38■□□□□ 0.69
POLR2J3Q9H1A7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms