Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AMBRA1Q9C0C7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 AC133561.4-201ENST00000566112 224 ntBASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 AL138724.1-201ENST00000606771 1088 ntBASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AMBRA1Q9C0C7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 UNC93B3-201ENST00000308076 687 ntBASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 SYT6-210ENST00000641643 1587 ntBASIC19.66■□□□□ 0.74
AMBRA1Q9C0C7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 AC003102.1-202ENST00000563394 1796 ntBASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 AC106739.1-201ENST00000617035 715 ntBASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
AMBRA1Q9C0C7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
AMBRA1Q9C0C7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 AL136162.1-201ENST00000607711 1078 ntBASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AMBRA1Q9C0C7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 AP004607.7-201ENST00000527152 1677 ntBASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AMBRA1Q9C0C7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms