Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FOXP3Q9BZS1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
FOXP3Q9BZS1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXP3Q9BZS1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXP3Q9BZS1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXP3Q9BZS1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.7■■□□□ 1.07
FOXP3Q9BZS1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
FOXP3Q9BZS1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXP3Q9BZS1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 AL157384.1-201ENST00000445995 2473 ntBASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 AC126544.1-201ENST00000580842 1059 ntBASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXP3Q9BZS1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXP3Q9BZS1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXP3Q9BZS1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 AC003102.1-202ENST00000563394 1796 ntBASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms