Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SMR3AQ99954 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMR3AQ99954 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.35■□□□□ 0.37
SMR3AQ99954 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SMR3AQ99954 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SMR3AQ99954 AC233702.5-201ENST00000584107 538 ntBASIC17.35■□□□□ 0.37
SMR3AQ99954 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.35■□□□□ 0.37
SMR3AQ99954 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMR3AQ99954 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SMR3AQ99954 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SMR3AQ99954 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMR3AQ99954 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.35■□□□□ 0.37
SMR3AQ99954 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMR3AQ99954 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.35■□□□□ 0.37
SMR3AQ99954 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMR3AQ99954 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SMR3AQ99954 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMR3AQ99954 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMR3AQ99954 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.34■□□□□ 0.37
SMR3AQ99954 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.34■□□□□ 0.37
SMR3AQ99954 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.34■□□□□ 0.37
SMR3AQ99954 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMR3AQ99954 OR7E47P-201ENST00000546390 1422 ntBASIC17.34■□□□□ 0.37
SMR3AQ99954 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.34■□□□□ 0.37
SMR3AQ99954 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.34■□□□□ 0.37
SMR3AQ99954 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.34■□□□□ 0.37
SMR3AQ99954 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.34■□□□□ 0.37
SMR3AQ99954 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMR3AQ99954 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.34■□□□□ 0.37
SMR3AQ99954 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMR3AQ99954 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.33■□□□□ 0.37
SMR3AQ99954 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMR3AQ99954 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.33■□□□□ 0.37
SMR3AQ99954 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMR3AQ99954 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMR3AQ99954 POU5F1P4-201ENST00000413175 1085 ntBASIC17.33■□□□□ 0.36
SMR3AQ99954 TMPOP1-202ENST00000424642 1267 ntBASIC17.33■□□□□ 0.36
SMR3AQ99954 AC012618.2-201ENST00000428058 849 ntBASIC17.33■□□□□ 0.36
SMR3AQ99954 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.33■□□□□ 0.36
SMR3AQ99954 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMR3AQ99954 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.33■□□□□ 0.36
SMR3AQ99954 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMR3AQ99954 RN7SL850P-201ENST00000579959 291 ntBASIC17.33■□□□□ 0.36
SMR3AQ99954 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.33■□□□□ 0.36
SMR3AQ99954 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.33■□□□□ 0.36
SMR3AQ99954 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.33■□□□□ 0.36
SMR3AQ99954 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMR3AQ99954 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMR3AQ99954 AC004812.2-201ENST00000611079 2094 ntBASIC17.32■□□□□ 0.36
SMR3AQ99954 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMR3AQ99954 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMR3AQ99954 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMR3AQ99954 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.31■□□□□ 0.36
SMR3AQ99954 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.31■□□□□ 0.36
SMR3AQ99954 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.31■□□□□ 0.36
SMR3AQ99954 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.31■□□□□ 0.36
SMR3AQ99954 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.31■□□□□ 0.36
SMR3AQ99954 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.31■□□□□ 0.36
SMR3AQ99954 AC097493.4-201ENST00000641197 219 ntBASIC17.31■□□□□ 0.36
SMR3AQ99954 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 LINC01960-201ENST00000563759 1884 ntBASIC17.31■□□□□ 0.36
SMR3AQ99954 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMR3AQ99954 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
SMR3AQ99954 KRT16P2-201ENST00000414673 1423 ntBASIC17.3■□□□□ 0.36
SMR3AQ99954 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.3■□□□□ 0.36
SMR3AQ99954 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.3■□□□□ 0.36
SMR3AQ99954 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMR3AQ99954 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.3■□□□□ 0.36
SMR3AQ99954 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.3■□□□□ 0.36
SMR3AQ99954 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.3■□□□□ 0.36
SMR3AQ99954 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMR3AQ99954 C2orf69P4-201ENST00000565394 541 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms