Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.06■□□□□ 0.96
LYSMD1Q96S90 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.06■□□□□ 0.96
LYSMD1Q96S90 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.06■□□□□ 0.96
LYSMD1Q96S90 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.06■□□□□ 0.96
LYSMD1Q96S90 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LYSMD1Q96S90 AC061975.6-201ENST00000579045 1553 ntBASIC21.06■□□□□ 0.96
LYSMD1Q96S90 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 AC092437.1-201ENST00000624794 1048 ntBASIC21.05■□□□□ 0.96
LYSMD1Q96S90 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
LYSMD1Q96S90 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 AC120498.10-201ENST00000621827 505 ntBASIC21.04■□□□□ 0.96
LYSMD1Q96S90 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LYSMD1Q96S90 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 SLC7A5P2-201ENST00000553010 536 ntBASIC21.03■□□□□ 0.96
LYSMD1Q96S90 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 UBE2DNL-204ENST00000602536 740 ntBASIC21.03■□□□□ 0.96
LYSMD1Q96S90 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LYSMD1Q96S90 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.02■□□□□ 0.96
LYSMD1Q96S90 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 AC016769.1-201ENST00000409132 1010 ntBASIC21.02■□□□□ 0.96
LYSMD1Q96S90 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 MYCNOS-205ENST00000641950 531 ntBASIC21.02■□□□□ 0.96
LYSMD1Q96S90 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.02■□□□□ 0.96
LYSMD1Q96S90 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD1Q96S90 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD1Q96S90 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD1Q96S90 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
LYSMD1Q96S90 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LYSMD1Q96S90 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 IKBKGP1-201ENST00000612193 1073 ntBASIC21.01■□□□□ 0.95
LYSMD1Q96S90 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 Z98882.1-201ENST00000622160 2253 ntBASIC21.01■□□□□ 0.95
LYSMD1Q96S90 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD1Q96S90 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD1Q96S90 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21■□□□□ 0.95
LYSMD1Q96S90 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21■□□□□ 0.95
LYSMD1Q96S90 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LYSMD1Q96S90 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21■□□□□ 0.95
LYSMD1Q96S90 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
LYSMD1Q96S90 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
LYSMD1Q96S90 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21■□□□□ 0.95
LYSMD1Q96S90 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21■□□□□ 0.95
LYSMD1Q96S90 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD1Q96S90 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD1Q96S90 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD1Q96S90 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms