Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 AC005082.1-201ENST00000413042 2259 ntBASIC17.93■□□□□ 0.46
CITED4Q96RK1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CITED4Q96RK1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
CITED4Q96RK1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.93■□□□□ 0.46
CITED4Q96RK1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CITED4Q96RK1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CITED4Q96RK1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.92■□□□□ 0.46
CITED4Q96RK1 MIR6765-201ENST00000614092 87 ntBASIC17.92■□□□□ 0.46
CITED4Q96RK1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CITED4Q96RK1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CITED4Q96RK1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CITED4Q96RK1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 BX323043.1-201ENST00000641006 1765 ntBASIC17.91■□□□□ 0.46
CITED4Q96RK1 SMG8-203ENST00000578922 2178 ntBASIC17.91■□□□□ 0.46
CITED4Q96RK1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 AC018755.3-202ENST00000596210 929 ntBASIC17.91■□□□□ 0.46
CITED4Q96RK1 AC131212.1-201ENST00000613771 668 ntBASIC17.91■□□□□ 0.46
CITED4Q96RK1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CITED4Q96RK1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.91■□□□□ 0.46
CITED4Q96RK1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.9■□□□□ 0.46
CITED4Q96RK1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CITED4Q96RK1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms