Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC3BQ96PB8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 AC091874.3-201ENST00000512672 1195 ntBASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC3BQ96PB8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.71■■□□□ 1.07
LRRC3BQ96PB8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 AC097658.1-201ENST00000475555 843 ntBASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC3BQ96PB8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 KRT18P29-201ENST00000397031 1267 ntBASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 DUSP5P2-201ENST00000426873 1033 ntBASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC3BQ96PB8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 AC010542.4-201ENST00000563151 1910 ntBASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC3BQ96PB8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 AC091799.1-201ENST00000422823 811 ntBASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRC3BQ96PB8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms