Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FOXRED1Q96CU9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 AL157384.1-201ENST00000445995 2473 ntBASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXRED1Q96CU9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FOXRED1Q96CU9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FOXRED1Q96CU9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.27■□□□□ 0.51
FOXRED1Q96CU9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXRED1Q96CU9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXRED1Q96CU9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 AP004607.7-201ENST00000527152 1677 ntBASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 DUX4L19-201ENST00000557448 1267 ntBASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 AC003102.1-202ENST00000563394 1796 ntBASIC18.25■□□□□ 0.51
FOXRED1Q96CU9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 FEM1AP1-201ENST00000431297 1995 ntBASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FOXRED1Q96CU9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXRED1Q96CU9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXRED1Q96CU9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms