Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 AC055733.4-201ENST00000638462 1354 ntBASIC20.84■□□□□ 0.93
SH3KBP1Q96B97 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3KBP1Q96B97 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
SH3KBP1Q96B97 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3KBP1Q96B97 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 AC080038.1-201ENST00000611274 1154 ntBASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 BID-214ENST00000617586 542 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 C11orf96-202ENST00000528572 1834 ntBASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3KBP1Q96B97 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 AC104187.1-201ENST00000607510 612 ntBASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3KBP1Q96B97 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3KBP1Q96B97 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms