Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.27■□□□□ 0.51
APOBEC3DQ96AK3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
APOBEC3DQ96AK3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
APOBEC3DQ96AK3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
APOBEC3DQ96AK3 KRT87P-202ENST00000534226 1464 ntBASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 AC053503.5-201ENST00000601508 636 ntBASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
APOBEC3DQ96AK3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 AC026310.3-201ENST00000625186 2373 ntBASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 EEF1DP3-203ENST00000566025 782 ntBASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
APOBEC3DQ96AK3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 TERF1P2-201ENST00000583350 1212 ntBASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
APOBEC3DQ96AK3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 AC007375.3-201ENST00000600936 2314 ntBASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
APOBEC3DQ96AK3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
APOBEC3DQ96AK3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.21■□□□□ 0.51
APOBEC3DQ96AK3 KRT18P14-201ENST00000534205 1250 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms