Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKL2Q92772 BX842568.3-201ENST00000418104 571 ntBASIC21.23■□□□□ 0.99
CDKL2Q92772 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.23■□□□□ 0.99
CDKL2Q92772 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDKL2Q92772 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDKL2Q92772 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKL2Q92772 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKL2Q92772 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.22■□□□□ 0.99
CDKL2Q92772 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKL2Q92772 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDKL2Q92772 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CDKL2Q92772 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKL2Q92772 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.22■□□□□ 0.99
CDKL2Q92772 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDKL2Q92772 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDKL2Q92772 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKL2Q92772 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDKL2Q92772 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.21■□□□□ 0.99
CDKL2Q92772 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.21■□□□□ 0.99
CDKL2Q92772 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.21■□□□□ 0.99
CDKL2Q92772 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.21■□□□□ 0.99
CDKL2Q92772 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.21■□□□□ 0.99
CDKL2Q92772 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
CDKL2Q92772 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDKL2Q92772 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.2■□□□□ 0.99
CDKL2Q92772 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDKL2Q92772 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.2■□□□□ 0.99
CDKL2Q92772 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDKL2Q92772 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CDKL2Q92772 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKL2Q92772 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKL2Q92772 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDKL2Q92772 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDKL2Q92772 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 AL136116.3-201ENST00000402907 1138 ntBASIC21.2■□□□□ 0.98
CDKL2Q92772 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.2■□□□□ 0.98
CDKL2Q92772 SMUG1P1-201ENST00000590640 811 ntBASIC21.2■□□□□ 0.98
CDKL2Q92772 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.2■□□□□ 0.98
CDKL2Q92772 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKL2Q92772 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDKL2Q92772 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.2■□□□□ 0.98
CDKL2Q92772 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CDKL2Q92772 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDKL2Q92772 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.19■□□□□ 0.98
CDKL2Q92772 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDKL2Q92772 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.19■□□□□ 0.98
CDKL2Q92772 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CDKL2Q92772 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDKL2Q92772 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDKL2Q92772 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDKL2Q92772 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms