Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.82■■■□□ 2.04
RAPGEF4Q8WZA2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.82■■■□□ 2.04
RAPGEF4Q8WZA2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
RAPGEF4Q8WZA2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.82■■■□□ 2.04
RAPGEF4Q8WZA2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF4Q8WZA2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RAPGEF4Q8WZA2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 AC093323.1-202ENST00000635031 2045 ntBASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.81■■■□□ 2.04
RAPGEF4Q8WZA2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RAPGEF4Q8WZA2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 LSM12P1-201ENST00000411836 588 ntBASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 AC006058.3-201ENST00000606217 1069 ntBASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.79■■■□□ 2.04
RAPGEF4Q8WZA2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 GCSHP5-201ENST00000443090 522 ntBASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.78■■■□□ 2.04
RAPGEF4Q8WZA2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RAPGEF4Q8WZA2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
RAPGEF4Q8WZA2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RAPGEF4Q8WZA2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RAPGEF4Q8WZA2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.76■■■□□ 2.03
RAPGEF4Q8WZA2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RAPGEF4Q8WZA2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 AC092053.2-201ENST00000640557 1818 ntBASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RAPGEF4Q8WZA2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms