Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC32.69■■■□□ 2.82
CCNB3Q8WWL7 AC092053.2-201ENST00000640557 1818 ntBASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 MIR4758-201ENST00000577688 71 ntBASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CCNB3Q8WWL7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC32.67■■■□□ 2.82
CCNB3Q8WWL7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 AC008175.2-201ENST00000612840 297 ntBASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC32.66■■■□□ 2.82
CCNB3Q8WWL7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 PPP1R14BP2-201ENST00000426284 444 ntBASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 AC066615.1-201ENST00000640911 628 ntBASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCNB3Q8WWL7 ECEL1P1-201ENST00000373592 1742 ntBASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 AC092118.2-201ENST00000613495 667 ntBASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
CCNB3Q8WWL7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 POU5F1P4-201ENST00000413175 1085 ntBASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 AC069236.1-201ENST00000604339 616 ntBASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 AC120498.10-201ENST00000621827 505 ntBASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC32.63■■■□□ 2.81
CCNB3Q8WWL7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 AL512625.2-201ENST00000417533 625 ntBASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC32.62■■■□□ 2.81
CCNB3Q8WWL7 KRT16P2-201ENST00000414673 1423 ntBASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 AC026471.6-201ENST00000622954 1905 ntBASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 RBM17P2-201ENST00000616397 1405 ntBASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CCNB3Q8WWL7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 FAM99A-202ENST00000538190 1989 ntBASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
CCNB3Q8WWL7 FAM201B-201ENST00000458407 597 ntBASIC32.59■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms