Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SCFD1Q8WVM8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 CCDC92B-201ENST00000575506 885 ntBASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.21■■□□□ 1.31
SCFD1Q8WVM8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SCFD1Q8WVM8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SCFD1Q8WVM8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.18■■□□□ 1.3
SCFD1Q8WVM8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 KRT18P14-201ENST00000534205 1250 ntBASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.17■■□□□ 1.3
SCFD1Q8WVM8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SCFD1Q8WVM8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SCFD1Q8WVM8 AC061975.6-201ENST00000579045 1553 ntBASIC23.14■■□□□ 1.3
SCFD1Q8WVM8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.14■■□□□ 1.3
SCFD1Q8WVM8 AL049796.1-201ENST00000565336 1766 ntBASIC23.14■■□□□ 1.3
SCFD1Q8WVM8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms