Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PLK5-205ENST00000642079 1969 ntBASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 AC087289.5-201ENST00000586076 3175 ntBASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNIH3Q8TBE1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CNIH3Q8TBE1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNIH3Q8TBE1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 AC012354.3-201ENST00000623734 483 ntBASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNIH3Q8TBE1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
CNIH3Q8TBE1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 AC027702.1-201ENST00000563810 1770 ntBASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 AC112907.3-201ENST00000577781 2400 ntBASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNIH3Q8TBE1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 AC103834.1-201ENST00000520383 144 ntBASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 AC103724.3-201ENST00000564481 992 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms