Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 OXCT2P1-201ENST00000447263 1535 ntBASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CFAP61Q8NHU2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CFAP61Q8NHU2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 AC105265.2-201ENST00000467189 838 ntBASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CFAP61Q8NHU2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CFAP61Q8NHU2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CFAP61Q8NHU2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 OR7E47P-201ENST00000546390 1422 ntBASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.18■□□□□ 0.98
CFAP61Q8NHU2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CFAP61Q8NHU2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms