Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 AC005224.4-201ENST00000583262 1652 ntBASIC6.46□□□□□ -1.38
SYNE1Q8NF91 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 MIPEPP3-201ENST00000412105 444 ntBASIC6.46□□□□□ -1.38
SYNE1Q8NF91 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 GCA-201ENST00000233612 1694 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 SERP1-208ENST00000491660 830 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE1Q8NF91 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 NAA20-201ENST00000310450 920 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 AC008694.1-202ENST00000636953 945 ntBASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 DET1-205ENST00000558413 583 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 AP001160.3-201ENST00000601484 763 ntBASIC6.45□□□□□ -1.38
SYNE1Q8NF91 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 POU5F1P3-201ENST00000428824 1078 ntBASIC6.45□□□□□ -1.38
SYNE1Q8NF91 AC083906.2-201ENST00000511578 360 ntBASIC6.45□□□□□ -1.38
SYNE1Q8NF91 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 AL121832.2-201ENST00000610979 668 ntBASIC6.45□□□□□ -1.38
SYNE1Q8NF91 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC6.45□□□□□ -1.38
SYNE1Q8NF91 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 AC068338.2-201ENST00000563278 1430 ntBASIC6.44□□□□□ -1.38
SYNE1Q8NF91 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 MYC-209ENST00000641252 345 ntBASIC6.44□□□□□ -1.38
SYNE1Q8NF91 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE1Q8NF91 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms