Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PAF1Q8N7H5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PAF1Q8N7H5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.59■■□□□ 1.05
PAF1Q8N7H5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.58■■□□□ 1.05
PAF1Q8N7H5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.58■■□□□ 1.05
PAF1Q8N7H5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.58■■□□□ 1.04
PAF1Q8N7H5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PAF1Q8N7H5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PAF1Q8N7H5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PAF1Q8N7H5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
PAF1Q8N7H5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PAF1Q8N7H5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L2-201ENST00000561772 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L6-201ENST00000626483 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L1-201ENST00000627662 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L8-201ENST00000629013 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L3-201ENST00000630187 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L7-201ENST00000630678 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 DUX4L5-201ENST00000630834 1275 ntBASIC21.57■■□□□ 1.04
PAF1Q8N7H5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PAF1Q8N7H5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 AP006587.3-201ENST00000525742 1516 ntBASIC21.56■■□□□ 1.04
PAF1Q8N7H5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 AL162430.1-201ENST00000480705 870 ntBASIC21.56■■□□□ 1.04
PAF1Q8N7H5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.56■■□□□ 1.04
PAF1Q8N7H5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 NTF6G-201ENST00000591094 616 ntBASIC21.55■■□□□ 1.04
PAF1Q8N7H5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PAF1Q8N7H5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PAF1Q8N7H5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms