Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 KRT16P2-201ENST00000414673 1423 ntBASIC22.22■■□□□ 1.15
TTC9BQ8N6N2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 GUSBP5-202ENST00000510805 1989 ntBASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 AC007322.4-201ENST00000509611 723 ntBASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 C11orf96-202ENST00000528572 1834 ntBASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC9BQ8N6N2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 AC093787.1-201ENST00000450396 207 ntBASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 AC016405.3-201ENST00000607710 860 ntBASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
TTC9BQ8N6N2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 SLC29A4P1-201ENST00000398760 971 ntBASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC9BQ8N6N2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 AC242852.2-201ENST00000615738 1807 ntBASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC9BQ8N6N2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.17■■□□□ 1.14
TTC9BQ8N6N2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC9BQ8N6N2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms