Protein–RNA interactions for Protein: Q8N5H7

SH2D3C, SH2 domain-containing protein 3C, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3CQ8N5H7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.24■■□□□ 1.15
SH2D3CQ8N5H7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 LINC01521-201ENST00000504184 1943 ntBASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.23■■□□□ 1.15
SH2D3CQ8N5H7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 YBX1P1-201ENST00000445822 960 ntBASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SH2D3CQ8N5H7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.21■■□□□ 1.15
SH2D3CQ8N5H7 Z98882.1-201ENST00000622160 2253 ntBASIC22.2■■□□□ 1.15
SH2D3CQ8N5H7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SH2D3CQ8N5H7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.2■■□□□ 1.14
SH2D3CQ8N5H7 FEM1AP4-201ENST00000443167 1987 ntBASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D3CQ8N5H7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 OXCT2P1-201ENST00000447263 1535 ntBASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 AC123595.1-201ENST00000440769 1046 ntBASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D3CQ8N5H7 LINC01960-201ENST00000563759 1884 ntBASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D3CQ8N5H7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms