Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.4■■□□□ 1.02
PGBD3Q8N328 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD3Q8N328 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD3Q8N328 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.4■■□□□ 1.02
PGBD3Q8N328 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD3Q8N328 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PGBD3Q8N328 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PGBD3Q8N328 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PGBD3Q8N328 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
PGBD3Q8N328 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PGBD3Q8N328 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PGBD3Q8N328 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PGBD3Q8N328 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD3Q8N328 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 AC073210.2-201ENST00000430369 194 ntBASIC21.39■■□□□ 1.01
PGBD3Q8N328 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 AC069236.1-201ENST00000604339 616 ntBASIC21.39■■□□□ 1.01
PGBD3Q8N328 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD3Q8N328 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD3Q8N328 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD3Q8N328 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
PGBD3Q8N328 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PGBD3Q8N328 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PGBD3Q8N328 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
PGBD3Q8N328 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.38■■□□□ 1.01
PGBD3Q8N328 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.38■■□□□ 1.01
PGBD3Q8N328 MIPEPP3-201ENST00000412105 444 ntBASIC21.38■■□□□ 1.01
PGBD3Q8N328 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.38■■□□□ 1.01
PGBD3Q8N328 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.38■■□□□ 1.01
PGBD3Q8N328 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PGBD3Q8N328 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PGBD3Q8N328 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PGBD3Q8N328 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PGBD3Q8N328 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PGBD3Q8N328 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.37■■□□□ 1.01
PGBD3Q8N328 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PGBD3Q8N328 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PGBD3Q8N328 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PGBD3Q8N328 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.37■■□□□ 1.01
PGBD3Q8N328 AC233723.2-201ENST00000623798 2106 ntBASIC21.37■■□□□ 1.01
PGBD3Q8N328 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 AC016405.3-201ENST00000607710 860 ntBASIC21.36■■□□□ 1.01
PGBD3Q8N328 OR10C1-204ENST00000622521 1039 ntBASIC21.36■■□□□ 1.01
PGBD3Q8N328 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PGBD3Q8N328 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PGBD3Q8N328 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PGBD3Q8N328 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PGBD3Q8N328 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PGBD3Q8N328 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.35■■□□□ 1.01
PGBD3Q8N328 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PGBD3Q8N328 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.35■■□□□ 1.01
PGBD3Q8N328 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PGBD3Q8N328 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.35■■□□□ 1.01
PGBD3Q8N328 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.35■■□□□ 1.01
PGBD3Q8N328 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PGBD3Q8N328 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PGBD3Q8N328 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PGBD3Q8N328 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.34■■□□□ 1.01
PGBD3Q8N328 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PGBD3Q8N328 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.34■■□□□ 1.01
PGBD3Q8N328 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PGBD3Q8N328 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PGBD3Q8N328 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PGBD3Q8N328 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PGBD3Q8N328 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms