Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 POU5F1P4-201ENST00000413175 1085 ntBASIC22.22■■□□□ 1.15
NUP93Q8N1F7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NUP93Q8N1F7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 ECEL1P1-201ENST00000373592 1742 ntBASIC22.21■■□□□ 1.15
NUP93Q8N1F7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 DUX4L16-201ENST00000555130 1264 ntBASIC22.21■■□□□ 1.15
NUP93Q8N1F7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 AC120498.10-201ENST00000621827 505 ntBASIC22.21■■□□□ 1.15
NUP93Q8N1F7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.21■■□□□ 1.15
NUP93Q8N1F7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
NUP93Q8N1F7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NUP93Q8N1F7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 AC231657.2-201ENST00000624556 255 ntBASIC22.19■■□□□ 1.14
NUP93Q8N1F7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NUP93Q8N1F7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 AC010536.3-201ENST00000620306 533 ntBASIC22.18■■□□□ 1.14
NUP93Q8N1F7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NUP93Q8N1F7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NUP93Q8N1F7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 CROCCP5-201ENST00000436658 830 ntBASIC22.16■■□□□ 1.14
NUP93Q8N1F7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 AC061975.6-201ENST00000579045 1553 ntBASIC22.16■■□□□ 1.14
NUP93Q8N1F7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUP93Q8N1F7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms