Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ABCA6Q8N139 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ABCA6Q8N139 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ABCA6Q8N139 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC31.69■■■□□ 2.66
ABCA6Q8N139 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ABCA6Q8N139 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC31.69■■■□□ 2.66
ABCA6Q8N139 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ABCA6Q8N139 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
ABCA6Q8N139 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
ABCA6Q8N139 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
ABCA6Q8N139 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
ABCA6Q8N139 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
ABCA6Q8N139 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ABCA6Q8N139 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
ABCA6Q8N139 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
ABCA6Q8N139 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
ABCA6Q8N139 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC31.67■■■□□ 2.66
ABCA6Q8N139 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC31.67■■■□□ 2.66
ABCA6Q8N139 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
ABCA6Q8N139 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ABCA6Q8N139 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ABCA6Q8N139 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC31.67■■■□□ 2.66
ABCA6Q8N139 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
ABCA6Q8N139 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.66■■■□□ 2.66
ABCA6Q8N139 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ABCA6Q8N139 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
ABCA6Q8N139 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.66■■■□□ 2.66
ABCA6Q8N139 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.65■■■□□ 2.66
ABCA6Q8N139 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.65■■■□□ 2.66
ABCA6Q8N139 AC010331.1-201ENST00000611423 582 ntBASIC31.65■■■□□ 2.66
ABCA6Q8N139 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
ABCA6Q8N139 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC31.65■■■□□ 2.66
ABCA6Q8N139 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ABCA6Q8N139 FAM210CP-201ENST00000445714 574 ntBASIC31.64■■■□□ 2.66
ABCA6Q8N139 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
ABCA6Q8N139 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
ABCA6Q8N139 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
ABCA6Q8N139 MIR1224-201ENST00000408193 85 ntBASIC31.64■■■□□ 2.65
ABCA6Q8N139 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.65
ABCA6Q8N139 AC091799.1-201ENST00000422823 811 ntBASIC31.64■■■□□ 2.65
ABCA6Q8N139 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.64■■■□□ 2.65
ABCA6Q8N139 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC31.64■■■□□ 2.65
ABCA6Q8N139 FAM21FP-204ENST00000608637 956 ntBASIC31.64■■■□□ 2.65
ABCA6Q8N139 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
ABCA6Q8N139 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ABCA6Q8N139 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.63■■■□□ 2.65
ABCA6Q8N139 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.63■■■□□ 2.65
ABCA6Q8N139 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
ABCA6Q8N139 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.62■■■□□ 2.65
ABCA6Q8N139 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
ABCA6Q8N139 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ABCA6Q8N139 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.62■■■□□ 2.65
ABCA6Q8N139 Z99916.2-201ENST00000604037 246 ntBASIC31.62■■■□□ 2.65
ABCA6Q8N139 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
ABCA6Q8N139 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ABCA6Q8N139 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ABCA6Q8N139 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
ABCA6Q8N139 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.61■■■□□ 2.65
ABCA6Q8N139 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC31.61■■■□□ 2.65
ABCA6Q8N139 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ABCA6Q8N139 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
ABCA6Q8N139 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.6■■■□□ 2.65
ABCA6Q8N139 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
ABCA6Q8N139 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ABCA6Q8N139 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.6■■■□□ 2.65
ABCA6Q8N139 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.6■■■□□ 2.65
ABCA6Q8N139 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ABCA6Q8N139 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
ABCA6Q8N139 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC31.59■■■□□ 2.65
ABCA6Q8N139 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.59■■■□□ 2.65
ABCA6Q8N139 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ABCA6Q8N139 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC31.59■■■□□ 2.65
ABCA6Q8N139 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC31.59■■■□□ 2.65
ABCA6Q8N139 LINC01023-201ENST00000606054 436 ntBASIC31.59■■■□□ 2.65
ABCA6Q8N139 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ABCA6Q8N139 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC31.59■■■□□ 2.65
ABCA6Q8N139 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC31.58■■■□□ 2.65
ABCA6Q8N139 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ABCA6Q8N139 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ABCA6Q8N139 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
ABCA6Q8N139 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
ABCA6Q8N139 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
ABCA6Q8N139 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.65
ABCA6Q8N139 AC012618.2-201ENST00000428058 849 ntBASIC31.57■■■□□ 2.64
ABCA6Q8N139 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ABCA6Q8N139 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.57■■■□□ 2.64
ABCA6Q8N139 SOX15-203ENST00000570788 1093 ntBASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms