Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 AC133041.1-202ENST00000642053 222 ntBASIC21.48■■□□□ 1.03
CHPFQ8IZ52 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHPFQ8IZ52 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 AC007322.4-201ENST00000509611 723 ntBASIC21.47■■□□□ 1.03
CHPFQ8IZ52 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 AC008694.1-202ENST00000636953 945 ntBASIC21.47■■□□□ 1.03
CHPFQ8IZ52 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.47■■□□□ 1.03
CHPFQ8IZ52 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.46■■□□□ 1.03
CHPFQ8IZ52 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 TSPY20P-201ENST00000450910 630 ntBASIC21.45■■□□□ 1.02
CHPFQ8IZ52 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CHPFQ8IZ52 MKRN4P-201ENST00000444706 1521 ntBASIC21.45■■□□□ 1.02
CHPFQ8IZ52 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 AC069236.1-201ENST00000604339 616 ntBASIC21.44■■□□□ 1.02
CHPFQ8IZ52 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 TMEM191A-211ENST00000637163 1067 ntBASIC21.44■■□□□ 1.02
CHPFQ8IZ52 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CHPFQ8IZ52 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 AL117328.2-201ENST00000624617 1940 ntBASIC21.43■■□□□ 1.02
CHPFQ8IZ52 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 AC073210.2-201ENST00000430369 194 ntBASIC21.43■■□□□ 1.02
CHPFQ8IZ52 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 MIR4758-201ENST00000577688 71 ntBASIC21.43■■□□□ 1.02
CHPFQ8IZ52 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 OR10C1-204ENST00000622521 1039 ntBASIC21.43■■□□□ 1.02
CHPFQ8IZ52 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CHPFQ8IZ52 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms