Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC116Q8IYX3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 AL024507.2-201ENST00000606070 2574 ntBASIC19.84■□□□□ 0.77
CCDC116Q8IYX3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC116Q8IYX3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 LINC02228-203ENST00000641970 1355 ntBASIC19.83■□□□□ 0.76
CCDC116Q8IYX3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC116Q8IYX3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 AC079140.4-201ENST00000507448 529 ntBASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC116Q8IYX3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC116Q8IYX3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC116Q8IYX3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC116Q8IYX3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms