Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC112229.1-201ENST00000639295 961 ntBASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CCDC60Q8IWA6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 AL109923.1-201ENST00000618799 583 ntBASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC60Q8IWA6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC60Q8IWA6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 GPX1P1-201ENST00000388829 606 ntBASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 C11orf96-202ENST00000528572 1834 ntBASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.52■■□□□ 1.36
CCDC60Q8IWA6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.51■■□□□ 1.35
CCDC60Q8IWA6 AC068338.2-201ENST00000563278 1430 ntBASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 RBM17P2-201ENST00000616397 1405 ntBASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 GUSBP6-202ENST00000438529 1198 ntBASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 AC007322.4-201ENST00000509611 723 ntBASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 AC083906.2-201ENST00000511578 360 ntBASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 AL121832.2-201ENST00000610979 668 ntBASIC23.5■■□□□ 1.35
CCDC60Q8IWA6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC60Q8IWA6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms