Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00346Q8IVM7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 AC091305.1-201ENST00000479476 895 ntBASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 AL136967.2-201ENST00000623968 743 ntBASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC00346Q8IVM7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 AC009237.3-201ENST00000393279 1427 ntBASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC00346Q8IVM7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 MIR572-201ENST00000384983 95 ntBASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 AL139246.5-201ENST00000606645 996 ntBASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.61■□□□□ 0.57
LINC00346Q8IVM7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00346Q8IVM7 BX005040.4-201ENST00000637145 1518 ntBASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 AC055733.4-201ENST00000638462 1354 ntBASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 SUDS3P1-201ENST00000505831 966 ntBASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms