Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NPAS4Q8IUM7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.75■■□□□ 1.23
NPAS4Q8IUM7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.75■■□□□ 1.23
NPAS4Q8IUM7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NPAS4Q8IUM7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
NPAS4Q8IUM7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
NPAS4Q8IUM7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 AC098590.1-201ENST00000468126 897 ntBASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 RPS2P52-201ENST00000469610 820 ntBASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
NPAS4Q8IUM7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.73■■□□□ 1.23
NPAS4Q8IUM7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 LSM12P1-201ENST00000411836 588 ntBASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.72■■□□□ 1.23
NPAS4Q8IUM7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 GCSHP5-201ENST00000443090 522 ntBASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPAS4Q8IUM7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
NPAS4Q8IUM7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 AC006058.3-201ENST00000606217 1069 ntBASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 FAM21FP-204ENST00000608637 956 ntBASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPAS4Q8IUM7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 AC092053.2-201ENST00000640557 1818 ntBASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.69■■□□□ 1.22
NPAS4Q8IUM7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms