Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
RNF135Q8IUD6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
RNF135Q8IUD6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
RNF135Q8IUD6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RNF135Q8IUD6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.32■■□□□ 1.16
RNF135Q8IUD6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 MYC-209ENST00000641252 345 ntBASIC22.32■■□□□ 1.16
RNF135Q8IUD6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF135Q8IUD6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 BX276092.2-201ENST00000417668 665 ntBASIC22.31■■□□□ 1.16
RNF135Q8IUD6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 AC008550.1-201ENST00000511500 884 ntBASIC22.31■■□□□ 1.16
RNF135Q8IUD6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
RNF135Q8IUD6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 AL512625.2-201ENST00000417533 625 ntBASIC22.3■■□□□ 1.16
RNF135Q8IUD6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF135Q8IUD6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 AC138907.5-202ENST00000569484 235 ntBASIC22.29■■□□□ 1.16
RNF135Q8IUD6 AC016405.3-201ENST00000607710 860 ntBASIC22.29■■□□□ 1.16
RNF135Q8IUD6 AC008694.1-202ENST00000636953 945 ntBASIC22.29■■□□□ 1.16
RNF135Q8IUD6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 C1orf229-201ENST00000623686 2258 ntBASIC22.29■■□□□ 1.16
RNF135Q8IUD6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF135Q8IUD6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 ECEL1P3-201ENST00000427961 737 ntBASIC22.28■■□□□ 1.16
RNF135Q8IUD6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF135Q8IUD6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF135Q8IUD6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms