Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TTC30AQ86WT1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC30AQ86WT1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 AC138907.5-202ENST00000569484 235 ntBASIC22.37■■□□□ 1.17
TTC30AQ86WT1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.37■■□□□ 1.17
TTC30AQ86WT1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC30AQ86WT1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
TTC30AQ86WT1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 AC244015.2-201ENST00000616358 1861 ntBASIC22.35■■□□□ 1.17
TTC30AQ86WT1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TTC30AQ86WT1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 KRT19P1-201ENST00000405746 1186 ntBASIC22.34■■□□□ 1.17
TTC30AQ86WT1 AC010141.2-201ENST00000452426 721 ntBASIC22.34■■□□□ 1.17
TTC30AQ86WT1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 AP001160.3-201ENST00000601484 763 ntBASIC22.34■■□□□ 1.17
TTC30AQ86WT1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
TTC30AQ86WT1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC30AQ86WT1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC30AQ86WT1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC30AQ86WT1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC30AQ86WT1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TTC30AQ86WT1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.33■■□□□ 1.17
TTC30AQ86WT1 ID1-201ENST00000376105 1233 ntBASIC22.33■■□□□ 1.17
TTC30AQ86WT1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms