Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 AC073314.1-201ENST00000568729 2216 ntBASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRTM1Q86UE6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 AC009299.2-201ENST00000482477 511 ntBASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRRTM1Q86UE6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 PLK5-205ENST00000642079 1969 ntBASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRTM1Q86UE6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.27■□□□□ 0.51
LRRTM1Q86UE6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRRTM1Q86UE6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.27■□□□□ 0.51
LRRTM1Q86UE6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRRTM1Q86UE6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRTM1Q86UE6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 RARRES2P1-201ENST00000474487 481 ntBASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRTM1Q86UE6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms