Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 AC016405.3-201ENST00000607710 860 ntBASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VPS13BQ7Z7G8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 C1QBPP2-201ENST00000528754 825 ntBASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 AL162412.1-201ENST00000567129 965 ntBASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 OR7E47P-201ENST00000546390 1422 ntBASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 RBM17P2-201ENST00000616397 1405 ntBASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VPS13BQ7Z7G8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 TSPY15P-201ENST00000457163 923 ntBASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VPS13BQ7Z7G8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AP003097.1-201ENST00000530657 1135 ntBASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms